PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dusal.0185s00013.1.p

Organism

Dunaliella salina

Taxonomic ID

3046

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella

Family

C2H2

Protein Properties

Length: 746aa MW: 77384.2 Da PI: 11.5144

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dusal.0185s00013.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.3	0.0011	575	594	2	22
EETTTTEEESSHHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt 22 +Cp C++sF ++ ++++H + Dusal.0185s00013.1.p 575 QCPTCSRSF-NQQSYQKHAKA 594 7********.88888888775 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13913	1.7E-8	572	595	No hit	No description
Pfam	PF13913	3.0E-6	698	720	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 746 aa Download sequence Send to blast
MMSEYGPIPS GSPQAGRRAA PMASRLPAPP AMGGMPVSYA GQPPPGQYFP PGAYPGASPA 60 SPMSQARFGR RASPGSDQGP GSGPLFPGQQ MPMGYNAQGR QGSLAGAPPQ DPAVAKAWAL 120 QQQQLMQQRG MSRIPNGAPP PAYTPSAHST MPPRPAPIHS QQPAPIARQP MFNGTQAPSA 180 GQRPPMGGVP GHPSGAGPPP MQRPMGGAPG QPAVPMYRGP PGVPGQPGAA AAPGMPAYRP 240 PNGKPAGPQQ GGLMPDGPQQ MRPPGSFVGP LGAASAPGQM PQRQPAAAVG AAPAGPPGSR 300 PVPVPMGVLS GMPNGPAGPR PMGQQAGPAA PMARQPLNGG QQQPGAAPSM GSFGQQGGPV 360 RPPHPSGPLA PSQHQGTPQP SQPGAAAATV PLGKLQQQPQ QQASQPRPIS AASANRAAAL 420 AALSQRKAAA AQVAQQQKLQ QQQQQQQASQ QQEQIRQQQL QQQQRQQEQA RQQQQQQQQQ 480 LAQQKQRARQ QLLQQQQQRR MQAQASQSRP PFSTSDEAPE DEDGSWEAPP QHQPVPQRSA 540 ASIDVSERPV GGSGSFAGGG MMMEEDPGPM GPMVQCPTCS RSFNQQSYQK HAKACAKVFA 600 SKRKVFNVAA ARVAGTEAAK YFDPKKGQPK NSSTAPSGTR RPNSALAAGK AAKAAKWKMQ 660 SEQLRAAMRC ARGEAQGKGG ADAGPSAPYQ PPVDLDDRVP CPHCGRKFAE LAAERHIPHC 720 ANTRAKPSFL NKQSGRGAYQ VGKKR*

Sequence ? help Back to Top

Protein Sequence Length: 746 aa Download sequence Send to blast

MMSEYGPIPS GSPQAGRRAA PMASRLPAPP AMGGMPVSYA GQPPPGQYFP PGAYPGASPA  60
SPMSQARFGR RASPGSDQGP GSGPLFPGQQ MPMGYNAQGR QGSLAGAPPQ DPAVAKAWAL  120
QQQQLMQQRG MSRIPNGAPP PAYTPSAHST MPPRPAPIHS QQPAPIARQP MFNGTQAPSA  180
GQRPPMGGVP GHPSGAGPPP MQRPMGGAPG QPAVPMYRGP PGVPGQPGAA AAPGMPAYRP  240
PNGKPAGPQQ GGLMPDGPQQ MRPPGSFVGP LGAASAPGQM PQRQPAAAVG AAPAGPPGSR  300
PVPVPMGVLS GMPNGPAGPR PMGQQAGPAA PMARQPLNGG QQQPGAAPSM GSFGQQGGPV  360
RPPHPSGPLA PSQHQGTPQP SQPGAAAATV PLGKLQQQPQ QQASQPRPIS AASANRAAAL  420
AALSQRKAAA AQVAQQQKLQ QQQQQQQASQ QQEQIRQQQL QQQQRQQEQA RQQQQQQQQQ  480
LAQQKQRARQ QLLQQQQQRR MQAQASQSRP PFSTSDEAPE DEDGSWEAPP QHQPVPQRSA  540
ASIDVSERPV GGSGSFAGGG MMMEEDPGPM GPMVQCPTCS RSFNQQSYQK HAKACAKVFA  600
SKRKVFNVAA ARVAGTEAAK YFDPKKGQPK NSSTAPSGTR RPNSALAAGK AAKAAKWKMQ  660
SEQLRAAMRC ARGEAQGKGG ADAGPSAPYQ PPVDLDDRVP CPHCGRKFAE LAAERHIPHC  720
ANTRAKPSFL NKQSGRGAYQ VGKKR*

Link Out ? help Back to Top
Phytozome	Dusal.0185s00013.1.p