PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information? help Back to Top

TF ID

Dusal.0273s00002.1.p

Organism

Taxonomic ID

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella

Family

Protein Properties

Length: 233aa MW: 25665.7 Da PI: 6.0706

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dusal.0273s00002.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	75.4	6.6e-24	168	218	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 + +isl++lskyF+l+i++A+k L+++ T LK+iCR+yG++RWPhRk++s+ Dusal.0273s00002.1.p 168 KTDISLQELSKYFHLTIAEASKALNLSGTSLKKICRKYGLERWPHRKVTSV 218 679*********************************************997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	16.301	153	232	IPR003035	RWP-RK domain
Pfam	PF02042	9.0E-21	171	218	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence Send to blast
MQGGGAECPD CVVVCTHAFT SHIDEAELIS QLHYVSGGHH ILLQRVETGQ PTYQFLFPLE 60 DALTTEYATV LYSHFLGSEF MRKDFVLKQT PSPTTLVPPA PPNPESGQQC PATVLVDPGP 120 AAPPDCGRPP EADNNDNDHD DDDRAEHDPS ETRKKTSMEH DPSETRKKTD ISLQELSKYF 180 HLTIAEASKA LNLSGTSLKK ICRKYGLERW PHRKVTSVNN KMARAIGPQH PS*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP84	16	50

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35590.1	2e-14	RWP-RK domain-containing protein

Link Out ? help Back to Top
Phytozome	Dusal.0273s00002.1.p