PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dusal.0500s00002.1.p
Organism
Dunaliella salina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
Family ERF
Protein Properties Length: 272aa    MW: 28124.9 Da    PI: 10.2428
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dusal.0500s00002.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83.2e-19125173355
                   AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                           y+G+r+++ +g+W+AeIrdp     +  +r +lg+f+taeeAa+a++aa ++++g
  Dusal.0500s00002.1.p 125 YRGIRQRP-WGKWAAEIRDP-----TagARRWLGTFDTAEEAARAYDAASRQIRG 173
                           9*******.**********9.....446**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.107.6E-31124181IPR001471AP2/ERF domain
SMARTSM003804.7E-33124187IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-22124182IPR016177DNA-binding domain
PROSITE profilePS5103223.341124181IPR001471AP2/ERF domain
PfamPF008473.4E-12125173IPR001471AP2/ERF domain
PRINTSPR003672.4E-11125136IPR001471AP2/ERF domain
CDDcd000182.05E-28125181No hitNo description
PRINTSPR003672.4E-11147163IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008219Biological Processcell death
GO:0009723Biological Processresponse to ethylene
GO:0009735Biological Processresponse to cytokinin
GO:0009753Biological Processresponse to jasmonic acid
GO:0010286Biological Processheat acclimation
GO:0034059Biological Processresponse to anoxia
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0051707Biological Processresponse to other organism
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0005886Cellular Componentplasma membrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MPTPPSPNDP HDPTDPNGFN EHEHRQQSQE QQQPVLPGGQ HPQSRRTASR NAAALLASAA  60
ADLDGDEASA SDSSETGKKR GASKGKARKP SANPPGNCAH PPPGGHLTGA VPPDQIKAKG  120
PNKTYRGIRQ RPWGKWAAEI RDPTAGARRW LGTFDTAEEA ARAYDAASRQ IRGPAAKCNF  180
PLPGETGAGR GTGARPDAKK VPAAANAAAA AAAQGTGLQG SHAPGPGVHG CAQKRARRTP  240
PPQQQQQQCF APGGPGLETS WSLLSDSFSQ D*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A5e-21118187169ATERF1
3gcc_A5e-21118187169ATERF1
5wx9_A7e-211251891580Ethylene-responsive transcription factor ERF096
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00109PBMTransfer from AT3G16770Download
Motif logo
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP1321540
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.12e-19ethylene response factor 110