PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dusal.2891s00001.1.p
Organism
Dunaliella salina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
Family ERF
Protein Properties Length: 264aa    MW: 27469.9 Da    PI: 10.0996
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dusal.2891s00001.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.97.1e-20190238355
                   AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                           y+GVr+++ +g+W+AeIrdp     +  +r +lg+f+taeeAa+a++aa ++++g
  Dusal.2891s00001.1.p 190 YRGVRQRP-WGKWAAEIRDP-----TagARRWLGTFDTAEEAARAYDAASRQIRG 238
                           9*******.**********9.....446**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.5E-22189247IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.2E-31189246IPR001471AP2/ERF domain
SMARTSM003803.3E-34189252IPR001471AP2/ERF domain
PROSITE profilePS5103223.525189246IPR001471AP2/ERF domain
CDDcd000181.45E-31190246No hitNo description
PRINTSPR003671.7E-11190201IPR001471AP2/ERF domain
PfamPF008475.8E-13190238IPR001471AP2/ERF domain
PRINTSPR003671.7E-11212228IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0016020Cellular Componentmembrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MDSTGHQNPF QGWVHPVLPV PPLPPTKGAS PLPPPVSSNG YSGIPSVLPP RNTASQLAPP  60
PPAAAYAAYA ANMPYAQMPA YAPAGGAPSL ASLQAASTPA LDSPLQTAPP PPQQHSRRAA  120
AAAARATVVA AAADEEASST DSGDFAERKP VRKKKPVKKE TPIKQHDESI VSTGPPAPDV  180
IYSKGPNKTY RGVRQRPWGK WAAEIRDPTA GARRWLGTFD TAEEAARAYD AASRQIRGPA  240
ARCNFPLPGE VSAAQVSMVS VDK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-20188247464ATERF1
3gcc_A1e-20188247464ATERF1
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00542DAPTransfer from AT5G44210Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP1321540
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.14e-19ERF family protein