PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT00107
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family C2H2
Protein Properties Length: 87aa    MW: 9375.57 Da    PI: 9.2855
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT00107genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H220.41.4e-064971123
              EEETTTTEEESSHHHHHHHHHHT CS
   zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
              y+Cp+C ++F +    + H+r+H
  EMT00107 49 YRCPICFRTFASAKAVHGHMRSH 71
              9*********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.160.601.2E-54773IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576671.56E-64775No hitNo description
PROSITE profilePS5015710.454976IPR007087Zinc finger, C2H2
SMARTSM003550.00244971IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002805171IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    Send to blast
MPGASHVHYL VAGGSGGGDD PRYPWSFKSL HEVDAVVPAI ARGAPVEPYR CPICFRTFAS  60
AKAVHGHMRS HTDRSWNLSV TSGRTSL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020175215.18e-40zinc finger protein ZAT9-like
TrEMBLA0A3B6TZE41e-57A0A3B6TZE4_WHEAT; Uncharacterized protein
STRINGEMT001073e-58(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP130102729
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.13e-07C2H2-like zinc finger protein