PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT00295
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family B3
Protein Properties Length: 774aa    MW: 87473.5 Da    PI: 8.2623
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT00295genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.21.6e-14157245198
               EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
               ff  l++s+++++   ++p ++  ++   +e++ t++l+ +sg+ W v+l   k sg+  +++GWkeF  ++ +  g  +vF++dg+s+f   v+vf+
  EMT00295 157 FFRSLMTSSSMEQE--TIPEDCH-KYL--EECTGTVSLRGPSGNLWPVEL--AKISGELCFARGWKEFLCDHCIVYGYLLVFRYDGNSQF--SVTVFS 245
               78899999999999..9998865.664..568889***************..*************************************9..888887 PP
2B335.12.4e-116757531797
               E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
        B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
               ++p  f+e++ +k  es+++tl d++ + W+v + y+++ +    +++GW   + +n L+ +D +vF+l + ++ + +++v+
  EMT00295 675 IIPDMFVENFLLK--ESRKMTLWDPQAKPWKVWYEYTGGECPrAAFSAGWGALAMENYLENRDLCVFELLD-DDYNIKLHVY 753
               79*****888777..5679***************99555554599***********************886.4554555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.103.6E-18151249IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019362.75E-18154249IPR015300DNA-binding pseudobarrel domain
CDDcd100171.93E-15155245No hitNo description
PfamPF023621.1E-11157245IPR003340B3 DNA binding domain
SMARTSM010194.1E-11157247IPR003340B3 DNA binding domain
PROSITE profilePS5086311.011186247IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.103.0E-15624754IPR015300DNA-binding pseudobarrel domain
CDDcd100175.45E-14629754No hitNo description
PROSITE profilePS5086311.096659756IPR003340B3 DNA binding domain
SMARTSM010191.3E-5664756IPR003340B3 DNA binding domain
SuperFamilySSF1019362.16E-13673754IPR015300DNA-binding pseudobarrel domain
PfamPF023625.2E-9675754IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 774 aa     Download sequence    Send to blast
MEKTRRFKSE RPSIVKEMKH IDVYALVLHE TEVCGICKGP IMVHQQKQYS NMGMIDDKQN  60
VKVKEGGGEN TNAKEKKKQS KEEGDKKKEV KKMTKYKEKK ERMRGNDKDN EKEKEDQRKM  120
KENEKKMRAH KEREEKKEND KEEELKEQND TKNCPQFFRS LMTSSSMEQE TIPEDCHKYL  180
EECTGTVSLR GPSGNLWPVE LAKISGELCF ARGWKEFLCD HCIVYGYLLV FRYDGNSQFS  240
VTVFSPSSCE APYAFLAQPQ RMGATAVAAH DEDGDTGTNA DGTAPQEEDS HIGTAADGTP  300
QNEGEEEEDA SEEYEGSDNM SVDADGAGPQ KEEEDALSEN PDNEEESEWR SAPLQQQKED  360
QDKIDNGFVV GKRTRFRKVD DIMTEVVRSK KSKAKEGKRH EAQSSDSKSE GEALGDSLAK  420
LGLRPPRKSK ATEEKRPEAP SGDSLAELVR RSPKKSKAEG KRSTALASKG AASSDSLKES  480
KRRPPRKPKA AKGKRPRAPC GHSESEGAAS GDSLAELVRR PPKKSRTEGK GSAASSASKG  540
MTSSHSLAGV FAPESVCKDL TKLHKSFGKK HSMKAQFPMF NKSNSENQPG RVIVKVQRRP  600
ELESQRRPIT QRDKEYAMER ARRFQSKRPF VIKEIKHTDV YVSYFMVIDQ ILLWMDTHIL  660
KLHCSLTDRP GTLQIIPDMF VENFLLKESR KMTLWDPQAK PWKVWYEYTG GECPRAAFSA  720
GWGALAMENY LENRDLCVFE LLDDDYNIKL HVYRAVLDIT PFALAPKHRQ QGCA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17278AKEKKKQ
2449455RRSPKKS
3476482LKESKRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020182314.10.0myb-like protein X
TrEMBLN1QP540.0N1QP54_AEGTA; B3 domain-containing protein
STRINGEMT002950.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2264526
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.14e-16B3 family protein