PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT01811
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family B3
Protein Properties Length: 640aa    MW: 71962.8 Da    PI: 7.2408
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT01811genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.61.4e-105466103599
               EEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE.E-SSSEE..EEEEE-S CS
        B3  35 tltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk.ldgrsefelvvkvfrk 99 
                +tl+   ++++W+ ++     ++ ++l+++W +Fv +n++++gD+++F   +g ++ +++v+++r+
  EMT01811 546 AVTLQMpGKSEKWRPRF--FIEKDNCMLAGNWLDFVCDNQVQAGDICIFVpAMGGERSTFTVHIIRA 610
               45555534669******..66667799***********************54455888889999986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.102.3E-14503611IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.1E-14503610IPR015300DNA-binding pseudobarrel domain
CDDcd100176.77E-12510609No hitNo description
PROSITE profilePS508639.911511611IPR003340B3 DNA binding domain
PfamPF023621.8E-8544610IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 640 aa     Download sequence    Send to blast
MRRSKGSGRR RAADERKLIR MADEAAAASS MQAAAAAALA SLHLPPPGLT ETDNQDRKIF  60
GRGARIKRKA KRKWGYVGAE AGAVDSGGLR PRLLSHRRST CRGGVGSMDE VLHGEVGIRS  120
RFSAGRIREI MRGLTPRQQG YVAKYGFEHF NRIGAFSVHE PLTEWIMGKI NPPFSEFRIN  180
ADKTIVFSKP LVQKILGVPT GGRPFVLHGQ KSDKIKELRD LYLNNGLRAT IPHCVSLLKN  240
NEDEESFMRT FLLLAAVLTP TTGNTIDLDY LWAFEDMSKV QDLDWAGHIT EHLMDEVQKF  300
QYKSREEKMR DFWVGGCLPL LTIAYMDHLD LPRGRIVDHE INYSVPRICH VSKDDFQFAA  360
IADLHRQHFK FATFGILPFR DRTPYTDNPV TDTEVAEDDL RILSNDQVLS GQWELVEVHE  420
QKIDELVKET QPEALGFAEA SIDHFRLGRT DISSNQVEDS GREYESSESD DHPTPPEADY  480
GVIFRSYLSG TQMESVNTLI HKIKPETIVF VATMRKSDVQ LPTPLLIISK ERSLAAAARF  540
PHENGAVTLQ MPGKSEKWRP RFFIEKDNCM LAGNWLDFVC DNQVQAGDIC IFVPAMGGER  600
STFTVHIIRA EATHQRGVKR VRSSHDSPVG VEGMTNPDAV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020201512.10.0uncharacterized protein LOC109787361
TrEMBLN1QSY80.0N1QSY8_AEGTA; B3 domain-containing protein
STRINGEMT018110.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP492169