PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT02851
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family GATA
Protein Properties Length: 430aa    MW: 46759.6 Da    PI: 9.9125
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT02851genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.72.4e-16342374133
      GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkk 33 
               C++C++  Tp+WR gp g+ tLCnaCG++y+  
  EMT02851 342 CTHCRVEGTPQWRTGPAGSGTLCNACGIRYKMG 374
               *******************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004016.6E-12336386IPR000679Zinc finger, GATA-type
PROSITE profilePS5011412.743336373IPR000679Zinc finger, GATA-type
SuperFamilySSF577161.47E-13338398No hitNo description
Gene3DG3DSA:3.30.50.101.2E-13340375IPR013088Zinc finger, NHR/GATA-type
CDDcd002026.48E-13341397No hitNo description
PROSITE patternPS003440342367IPR000679Zinc finger, GATA-type
PfamPF003203.4E-14342375IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    Send to blast
MVLGLPPEGH KQVAGPRTRP IYKETKRNTT SDVAQDEWRR KRHGSRGEAS SVWRPESTKG  60
YFRLGFVSVS PPFHTRWLLA TQATRNPSRR RMPNPTPYAS LLNDAPPADL DGADADLDLC  120
PDGGLCLPDD PLDTVIGYMS MLDDGFLEGL GLGCSPPRGR VGDGQDYSGG ALAGMKADAD  180
LGSLAEGRPL SLCDAGAPGG RKRSAFHMFD SKPEGLPPAR ARSLSCSTTT TSSSTASGAR  240
NLSPTSGGTE APREPASKDY DLRWTLPRKP HHRRAVRRRA ASWSLALPPQ LMSAGAYDCN  300
GDSNANDDKD KDYVLSHCKN GRGNGGPRPA RRQQKKTDGK ICTHCRVEGT PQWRTGPAGS  360
GTLCNACGIR YKMGKLFPEY RPSTSPEFGS LEHSNRHRNV ERIREKKMKV MVPEVPGMLQ  420
ADTTRTILRA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLN1QUE20.0N1QUE2_AEGTA; GATA transcription factor 14
STRINGEMT028510.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP16076913
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.11e-24GATA transcription factor 4