PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT03350
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 239aa    MW: 26759.9 Da    PI: 5.0999
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT03350genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM58.52.3e-18291613128
       NAM   3 pGfrFhPtdeelvveyLkkkvegkk...leleev.ikevdiykvePwdLp.kkvka..eekew.yfFskrdkkyatgk..rknratksgyWkatgkdkevl 93 
                G+rF+P+   lv  yL++k+ + +   +e+++v  ++vd+y + P+ Lp ++++   + k w +fF++r  ++a+g      r++  g W    ++k+  
  EMT03350  29 GGMRFDPNGRCLVRTYLTPKAIRGRlpnVEIKDViPDDVDVYGTRPEALPfHRCNRgaSGKVWgHFFTTRPAAAASGGpgSYVRVVPGGLWVRYDEEKAYA 129
               69******************8888867777778834567***********65444422566889*******9999876446778999************** PP

       NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
               +++g + g +  ++f+    ++g+ t W m+e+rl
  EMT03350 130 DAGGDVLGYRCRFAFH---GEDGKLTAWRMKEFRL 161
               ***************9...567789********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.11E-1923186IPR003441NAC domain
PROSITE profilePS5100519.70427188IPR003441NAC domain
PfamPF023657.7E-1030161IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
MANQREQQQA SLPRPPVPRK PRSMSELYGG MRFDPNGRCL VRTYLTPKAI RGRLPNVEIK  60
DVIPDDVDVY GTRPEALPFH RCNRGASGKV WGHFFTTRPA AAASGGPGSY VRVVPGGLWV  120
RYDEEKAYAD AGGDVLGYRC RFAFHGEDGK LTAWRMKEFR LNEGAAAYRG VAFHPVAKDL  180
VAWKVYNDVE EPPSDDEGED EDEDDEAEEM EVDDPVAAAA CTEDDLTQRQ DKKKKQKLQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020172477.11e-177NAC transcription factor NAM-1-like
TrEMBLA0A2X0S7H81e-176A0A2X0S7H8_WHEAT; Uncharacterized protein
TrEMBLR7W1Q01e-176R7W1Q0_AEGTA; Uncharacterized protein
STRINGEMT033501e-177(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP128912231