PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT03488
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family CAMTA
Protein Properties Length: 99aa    MW: 12200.8 Da    PI: 7.7386
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT03488genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-178.96.5e-252091475
      CG-1  4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKv 75
                k+ w k++e+++iL+n+e++ ++  ++++p+sgs++L++rk+ r++r DGy+w+k+ dgk+  E+he L v
  EMT03488 20 GvKTVWFKPREVLEILQNYERFPIQ-YKTQKPPSGSWFLFDRKVHRFYRSDGYQWQKRMDGKSDYEAHEYLEV 91
              44789*****************965.56789**************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143731.511499IPR005559CG-1 DNA-binding domain
SMARTSM010768.5E-71799IPR005559CG-1 DNA-binding domain
PfamPF038591.9E-212291IPR005559CG-1 DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    Send to blast
MSFISYLVDS DFDIQNLQHG VKTVWFKPRE VLEILQNYER FPIQYKTQKP PSGSWFLFDR  60
KVHRFYRSDG YQWQKRMDGK SDYEAHEYLE VLFNVYLVY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020197082.14e-57calmodulin-binding transcription activator 4-like, partial
TrEMBLN1QTG32e-67N1QTG3_AEGTA; Calmodulin-binding transcription activator 2
STRINGEMT034883e-68(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15485817
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.22e-22Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains