PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT03623
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ARR-B
Protein Properties Length: 218aa    MW: 24223.4 Da    PI: 8.2251
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT03623genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like21.17.1e-07192212121
   G2-like   1 kprlrWtpeLHerFveaveqL 21 
               k++++Wt e+He Fv+av+qL
  EMT03623 192 KKKVEWTREMHELFVNAVTQL 212
               6899****************9 PP
2Response_reg43.12.2e-15211291108
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTT..SEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempg..mdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                   vl vdD+p+ +  l+q+l++ gy ev++  ++ ea++ ++++    D i++ ++  g  mdGl llk++ ++   + ++v+++ +++e++ +  + G
      EMT03623  21 VLAVDDDPIYLYSLTQMLRRCGY-EVTAKPSPAEAVREVEKNPdgTDFIMTVVQTRGrgMDGLGLLKRLGKRY--PVVLVFSGDESMETRRRGNEGG 114
                   799********************.77777777777777766666999999999998888**********7766..6899999*************** PP

                   ESEEEESS--HHHHH CS
  Response_reg  94 akdflsKpfdpeelv 108
                   a   l+Kp   ++++
      EMT03623 115 ACYLLEKPLRDAQIH 129
                   *********999985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23003.3E-2217150No hitNo description
SuperFamilySSF521722.7E-2017143IPR011006CheY-like superfamily
SMARTSM004481.2E-1219132IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011027.60620136IPR001789Signal transduction response regulator, receiver domain
PfamPF000721.9E-1121129IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.89E-1322128No hitNo description
Gene3DG3DSA:1.10.10.606.9E-6190214IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0005622Cellular Componentintracellular
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    Send to blast
MANGDQDMAT DELMETEGLK VLAVDDDPIY LYSLTQMLRR CGYEVTAKPS PAEAVREVEK  60
NPDGTDFIMT VVQTRGRGMD GLGLLKRLGK RYPVVLVFSG DESMETRRRG NEGGACYLLE  120
KPLRDAQIHF IWQHVVRWRR NAAAAATANA DPRHSQGIHL DDTPRKRGQG VNDPNKGKGG  180
SEGGLQLGTT KKKKVEWTRE MHELFVNAVT QLKTTEGA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020163012.11e-130two-component response regulator ORR21-like
TrEMBLR7W1I11e-161R7W1I1_AEGTA; Two-component response regulator ARR12
STRINGEMT036231e-162(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1950623
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67710.13e-17response regulator 11