PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT03741
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 904aa    MW: 98239 Da    PI: 7.2326
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT03741genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH110.000797527693754
               -STCHHHHHHHHHHHHHH CS
       HLH  37 KlsKaeiLekAveYIksL 54 
               K++Ka+iL  ++eY+k+L
  EMT03741 752 KMDKASILGDTIEYVKQL 769
               89***************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142158.1E-1341154IPR025610Transcription factor MYC/MYB N-terminal
PfamPF142151.0E-23386478IPR025610Transcription factor MYC/MYB N-terminal
SuperFamilySSF474591.01E-8736787IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.44E-5739774No hitNo description
Gene3DG3DSA:4.10.280.102.1E-5750780IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 904 aa     Download sequence    Send to blast
MAAGGGAGAA VDVRHPLAAL PRPRCSLNFF CSSRESMGLH GSALVWAEGH YNGAIKTRKT  60
VQPAVAQAQA QAPAAEAADQ ARSRQLRELF DSLAREAAAG GGPGFRDVHG CAQEARRPSA  120
ALAPEDLTET EWFYLMSASY SFPPGVGLKG TTLCNVAYQE PASHVNLPGP RKVVQSVSHG  180
EAPSGQGIID HGHNIIWLGP KKPRGVPKLG GPAIAHHDGS CDLEEDQGLD VGDYLLRGDL  240
FDKGNLANCH DVAPLAGTSL PTTFSMRGCK SILHRRCIDR GTPRYIMGKV TYLAGKLLRT  300
LSSSMSMHQM GATSIFSKFV TRSAKNPPYK SLVLRHLHNG ISDLLLCDRV AKGRQVALRE  360
VYALPIEIMC PSLALVQHGS EVLLGQLLFL IMMHHCGAGG RSSSFYGLPG RAFARGGHVW  420
LSRANEVDSK AFSRAILARS AGIKTVVCIP IVDGVLEIGT TEKVEEDIGL VQYAMAIFMD  480
QQETHMTPSI CHSNQTSHID QQSFQTQGKT HTGQPKPEPN KFTPEYDDDE MEYDDNEIDT  540
ECASGSETNT GRGHCRHGPP NIASNDDHAT HNVGRSSELM QVEMSERVRD GCSSNLGDEI  600
QMLMVCQNSG DHSNLHGQDE PWHFLYEELC SGYPQSSGED QAMAENAHYA HTVSLILHRN  660
NALRQSDGPN TRSYLAVSHQ SSFSRWDAGI HGRAVAEGTT RQKMLKSVLL FFNAACNKPP  720
GDLRCDDAGA RREVDFGASH VMQERKRREK LKMDKASILG DTIEYVKQLT KRIQDLESSV  780
ARQQVHGDLL VPKGSSERRA LMGMEGPSSS SGSSSSAPVA TDVQVSIIES DALLELRCPD  840
RRGLLVTIMQ ALQEQLRLEV TSVQASSDRG VLLAEMRAKV REVHGRRSSI SQVKRAIHLI  900
ISSG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1743748ERKRRE
2744749RKRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020155869.10.0basic helix-loop-helix protein A
TrEMBLM8AGZ30.0M8AGZ3_AEGTA; Transcription factor TT8
STRINGEMT037410.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP88633036
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09820.17e-31bHLH family protein