PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT03936
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 290aa    MW: 32703.1 Da    PI: 5.1624
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT03936genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.41.2e-13190237355
               HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
               ++h + ErrRR+r+N+ f  L++l+P+        K++Ka+iL +++ Y+k+L+
  EMT03936 190 KTHVISERRRRERLNEMFMVLKSLVPSiH------KVDKASILLETIAYLKELE 237
               5899***********************66......****************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.082187236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.2E-17190251IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.0E-11190237IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.9E-17191250IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.8E-15193242IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.48E-7201241No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    Send to blast
MVHQIGTSFW ELHLPSFSAC LESEEPSSNP SLANETSEAG IMLKDLDHNA IEGMISELRE  60
VECLSDVNLE RVTKDMDEFH FLLEGLDRCA REDNWVMDMS FEFISSPQMV PSMESPCTED  120
VIVTLSSSVQ GTRPSCFIAW RRSPELKDMV ARVTDTKESQ KLLKKIVAGG AWTNNGDGGS  180
IARAQESNIK THVISERRRR ERLNEMFMVL KSLVPSIHKV DKASILLETI AYLKELEQRV  240
KELESNRATI EWRLHDVVGG KKNVSAGSKR KALEREHNDG QSNIVNVAEM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1195200ERRRRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020167141.10.0anthocyanin regulatory R-S protein-like
TrEMBLM8AHI10.0M8AHI1_AEGTA; Anthocyanin regulatory R-S protein
STRINGEMT039360.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP93233109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63650.31e-19bHLH family protein