PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT05067
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 208aa    MW: 22418.5 Da    PI: 10.4642
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT05067genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH222.9e-072490455
              HHHHHHHHHHHHHHHHHHHHHCTSCCC..................TTS-STCHHHHHHHHHHHHHHH CS
       HLH  4 ahnerErrRRdriNsafeeLrellPkas...............kapskKlsKaeiLekAveYIksLq 55
                + +E++RR +++    +L +llP +s               + ++   +  + L  A  YIk+L+
  EMT05067 24 ERKDVEKNRRLHMKGLCLKLSSLLPASSahhlrhysstsssppSSNKDAATQLDQLDSAAAYIKQLR 90
              56889*********************888************96666666****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.2162089IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.83E-822102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.6E-1023100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
MKSRRQSGRG GAMLPDGGCS GKMERKDVEK NRRLHMKGLC LKLSSLLPAS SAHHLRHYSS  60
TSSSPPSSNK DAATQLDQLD SAAAYIKQLR GRIDDLKRRK QAALSGGTAG CSSSVSAGDY  120
KGAPSTSTAL PVIEVRHQDG TLDVALASEA GRPFRLHEVI AVLEQEGADV VHNVVWGLSL  180
RPPERRVWVL FSRSKHCSSS VPILGLRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703061e-108HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020183666.11e-120uncharacterized protein LOC109769325
TrEMBLM8BQ171e-149M8BQ17_AEGTA; Uncharacterized protein
STRINGEMT050671e-149(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP82936133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10585.13e-08bHLH family protein