PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT05069
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 207aa    MW: 22685.3 Da    PI: 10.403
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT05069genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.11.6e-082574554
              HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHH CS
       HLH  5 hnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksL 54
              ++e E+ RR+r++   e+L +l+Pk  +  p++  ++    L  A  YIk+L
  EMT05069 25 KKELEKERRQRMKALCEKLASLIPKeHF--PHTDtMTQLGSLDVAASYIKKL 74
              6899*********************776..77777***************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.892074IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.71E-52578No hitNo description
SuperFamilySSF474594.71E-102589IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.5E-122590IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.9E-62574IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.4E-62680IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
MELKAKPARR GKRTRASGGT AVPVKKELEK ERRQRMKALC EKLASLIPKE HFPHTDTMTQ  60
LGSLDVAASY IKKLKERVDE QQHKKTSIQA IATLLGVSGI STPSITATTS GGAGSQGGEK  120
LEAWPLMVEV RQPGDASMEV RLICSAERPI KLHEVITILE EEGAVIINAN HFVAAHRIFY  180
TIHSRAFSTR IGIDVSRVSE RLGALVL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703061e-150HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020201042.11e-147uncharacterized protein LOC109786893
TrEMBLM8AUF91e-148M8AUF9_AEGTA; Uncharacterized protein
STRINGEMT050691e-149(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP82936133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10586.12e-13bHLH family protein