PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT05704
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 255aa    MW: 27096.2 Da    PI: 5.1179
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT05704genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY81.49.2e-26102162259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
               +Dg +WrKYGqK++ g+ +pr+Y+rCt++   gC+++k+v+r++ dp +++++Y g H++ 
  EMT05704 102 NDGLSWRKYGQKDILGAAYPRAYFRCTHRhsqGCQATKQVQRAHADPLLFDVVYLGAHTCA 162
               8***************************98999**************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.2E-2788163IPR003657WRKY domain
SuperFamilySSF1182902.22E-2494162IPR003657WRKY domain
PROSITE profilePS5081120.98996159IPR003657WRKY domain
SMARTSM007746.3E-37101163IPR003657WRKY domain
PfamPF031067.3E-25102161IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MEDTAATLAT ELDRLLAMAR ELEARVDGAP GAARELCAAL AESVDRAMRL AGSCPRGGGG  60
EGNAGNVRAS VSGQVRGGRK AGANKVRTQV RVASVTDAGP LNDGLSWRKY GQKDILGAAY  120
PRAYFRCTHR HSQGCQATKQ VQRAHADPLL FDVVYLGAHT CAQATAILAG PEQQPPAAFA  180
LEHQQQETSP EEGIQWPVEP VTPPPFPSSP ASCYTPGSPW CQLAGSYGYA AGGDDTEYDA  240
EFVEMFLNLS EFQNM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A4e-20101161868OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF3976160.0EF397616.1 Triticum aestivum cultivar Nongda 3338 WRKY19-b transcription factor (WRKY19-b) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020196714.10.0probable WRKY transcription factor 72
TrEMBLA0A452ZYX00.0A0A452ZYX0_AEGTS; Uncharacterized protein
STRINGEMT057040.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33553183
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.23e-29WRKY family protein