PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT05766
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 459aa    MW: 50927.9 Da    PI: 5.0358
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT05766genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.93.7e-13261307354
               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
               +a+ + E+ RR++iN ++  Lr+llP++     +K++ a+i+  A+eYI++L
  EMT05766 261 KANFATEKERREQINVKYGALRSLLPSP-----TKNDRASIVGDAIEYINEL 307
               68999***********************.....9***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.872258307IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.47E-10259312No hitNo description
PfamPF000102.3E-10261307IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.49E-12261318IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.7E-10264313IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-10265318IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0048658Biological Processanther wall tapetum development
GO:0052543Biological Processcallose deposition in cell wall
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 459 aa     Download sequence    Send to blast
MIAEGGYFDG SRDAILMAGS LIHDSLDSIC DNTEIEQGNF HGPSFFIEDI CNPTNLTSES  60
ARTINHIQHR AEFDMDQDLH GHMIQETQVE TSNWVPAMFG TQNHIISQQS IEQQMDDYDA  120
ASYPDGAHTA APDLLNLLQI PRYSMTTAFP STEHIFGDPG QNAGNQLDIN NDVLGRAIHD  180
SGMMLGDSTL PLQYNDNQSH LFKDLYHSLP QSFGLFSSDD ERDRAMGVVG AAGNILQEID  240
GRQFGSPKLG RSKKGGFGKA KANFATEKER REQINVKYGA LRSLLPSPTK NDRASIVGDA  300
IEYINELNRT LKELTSLVEG DTKHRMKRLK LDDAACDNGE SSSLQQVKDD QDSQLNGAIR  360
SSWIQRRSKE CHVDVRIVGN EINIKFTEKK KTNSLLCAAK VIDEFRLELI HVVGGVIGDQ  420
RIFMFNTKIS EGSSVYASAL ASKLLRAMEM EHLAVDIFS
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in the regulation of tapetum programmed cell death (PCD) and degradation during male reproductive development (PubMed:23519457, PubMed:23385589). Interacts with TDR and promote tapetal PCD by regulating the expression of RTS, and the two lipid-transfer proteins C4 and C6, which function in microspore development (PubMed:23519457). Acts downstream from and interacts with TDR in the regulation of tapetal PCD. Regulates directly the aspartic protease AP25 and AP37 during tapetal PCD (PubMed:23385589). May not target the cysteine protease CP1 (PubMed:23519457, PubMed:23385589). {ECO:0000269|PubMed:23385589, ECO:0000269|PubMed:23519457}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3576691e-126AK357669.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1058O16.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020146715.10.0transcription factor EAT1-like
SwissprotQ7X8R01e-167EAT1_ORYSJ; Transcription factor EAT1
TrEMBLA0A453PC340.0A0A453PC34_AEGTS; Uncharacterized protein
TrEMBLM8AMP40.0M8AMP4_AEGTA; Transcription factor bHLH89
STRINGEMT057660.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19043796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06170.23e-48bHLH family protein