PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT05868
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family SRS
Protein Properties Length: 202aa    MW: 22065.8 Da    PI: 8.7015
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT05868genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF70281.12.9e-2557108103154
    DUF702 103 sslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                slP++v+++avfrcvrv+svddg +e+aYq+avsi+Gh+f+G+LydqG+++
  EMT05868  57 DSLPRHVRAPAVFRCVRVTSVDDGADEFAYQAAVSINGHMFRGFLYDQGADN 108
               45***********************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF051428.9E-2351107IPR007818Protein of unknown function DUF702
TIGRFAMsTIGR016247.3E-2559105IPR006511Lateral Root Primordium type 1, C-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
MAPRRFGDGH VLGMDSRRRR KLSGVMVALM AERPHKVGAS FCSEDGPSED GDAPFRDSLP  60
RHVRAPAVFR CVRVTSVDDG ADEFAYQAAV SINGHMFRGF LYDQGADNGR ASNDEPSHAH  120
AAAVRSISDL HLGNASAVPP DMYNTVSGAL ILGGMGYANF QSFVSRSWKE NEKKTSQYFQ  180
ADSKLLGSRS WKPIMIILSS EK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3745321e-131AK374532.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv3068E07.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLM8BGL41e-147M8BGL4_AEGTA; Uncharacterized protein
STRINGEMT058681e-148(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35793679
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19790.28e-21SHI-related sequence 7