PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT06122
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 268aa    MW: 29388.8 Da    PI: 7.2383
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT06122genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH352.5e-115498755
              HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                Er+RR+++ + f eL  llP +    ++K++K +i+ +A++YIksL+
  EMT06122 54 VKERKRRREMSEMFTELHGLLPIL----HEKVDKPTIVMEAIHYIKSLE 98
              68*********************9....9******************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.79E-1445110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.4594797IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.0E-1148110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.5E-853103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.47E-954102No hitNo description
PfamPF000109.5E-95598IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MSFDKENNGC DKDQRSNQMV IHGAINNGKG IAKIEGEEDG RSGGHRGKRE LLAVKERKRR  60
REMSEMFTEL HGLLPILHEK VDKPTIVMEA IHYIKSLEGV LSELEKRKME EHVQGKIPTT  120
ANSGVSSSTA AATPIVLKTQ LNGLPNGGMC PTQEETWPTN DVGAMTAETA PVRLQTWSRR  180
NIVLSLFGNH ANINVCVARC PSMLTGVLAV LEKHNIDVIT SMIVSDNART IFTIQAQING  240
VSNLLGDNVA AEKIYKLAVS EIMILLPE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15660RKRRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020146364.16e-73transcription factor bHLH95-like
TrEMBLM8BT600.0M8BT60_AEGTA; Transcription factor bHLH95
STRINGEMT061220.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP20053691
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.11e-25bHLH family protein