PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT06498
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family C2H2
Protein Properties Length: 140aa    MW: 15111.6 Da    PI: 6.5073
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT06498genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.60.000843656323
              ETTTTEEESSHHHHHHHHHHT CS
   zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
              C +C + F+++  L  H++ H
  EMT06498 36 CVYCERKFRSSQALGGHQNAH 56
              ******************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576674.77E-92768No hitNo description
PROSITE profilePS5015710.9073461IPR007087Zinc finger, C2H2
PROSITE patternPS0002803658IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
MEQLTSDDCQ QEDELNLELT LRTTAAAEPD VGYFLCVYCE RKFRSSQALG GHQNAHKHER  60
SVAERQRLIP ATTRAHAVLV GAPAAAQDER QPGDPRGGGG DFMSAAGKAR KTAAGKTHTH  120
GRSSSEYGYG ADDVDLSLRL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020186466.15e-97protein LATE FLOWERING-like
TrEMBLM8BIC22e-98M8BIC2_AEGTA; Zinc finger protein 7
STRINGEMT064983e-99(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18336274
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80730.12e-12zinc-finger protein 1