PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT06626
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ZF-HD
Protein Properties Length: 152aa    MW: 17211.1 Da    PI: 10.5416
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT06626genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer38.42.8e-122458336
  ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.g 36
                 +v+YkeC +NhA ++ g+++DGCgE mp  + + +
     EMT06626 24 GVKYKECSRNHALATSGQVMDGCGECMPLGDLNpT 58
                 799************************98665544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD1257742.0E-42162IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047706.0E-92554IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152312.4642780IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
SuperFamilySSF466898.96E-684150IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.8E-1288151IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    Send to blast
MDIKYPKGFV KKVRQAVVAL AVKGVKYKEC SRNHALATSG QVMDGCGECM PLGDLNPTDA  60
SSYNRSLGAL RIQRLPAQLS PAMVAPHDVV MSARKWSRTM CTAYQKMRMQ ELSKHLGWPL  120
QKRDKDIIEA RCHDIGIGKD IFRNWRHSNK RN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020181134.16e-31zinc-finger homeodomain protein 9-like
TrEMBLM8APY41e-110M8APY4_AEGTA; ZF-HD homeobox protein
STRINGEMT066261e-111(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP36463374
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15210.17e-17homeobox protein 30