PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT06747
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 248aa    MW: 27169.7 Da    PI: 4.5119
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT06747genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.54.2e-1271117455
               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               ++ ++Er RR+r+N+++ +Lr ++P+      +K++Ka+i + A+ YI  Lq
  EMT06747  71 KNIIMERDRRRRLNEKLYNLRGVVPNI-----TKMDKASIIQDAIAYIEALQ 117
               56689*********************7.....7*****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.1E-1767131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.67567116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.40E-1368121No hitNo description
PfamPF000108.4E-1071117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-1572132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.1E-1473122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    Send to blast
MEADMDMSFD FSWETPNFFE AQVLELGVVD SMYLPAEDSL SGLYSCYDDS SSPDGASSWS  60
SAMTRATRAS KNIIMERDRR RRLNEKLYNL RGVVPNITKM DKASIIQDAI AYIEALQEQE  120
RQLLAEISDL EPDNCTAAVK TEDVASVGSQ AEEDGVGLPR QKKMRRTSSA SSINDAITSP  180
ATYPVEILEL EVTNVAEKLS VVSLRHGKAR DAMAKVCGAL QSLCLKVITA SVTTVAGGMV  240
HTMFVETH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3598501e-154AK359850.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1104J03.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020176410.10.0transcription factor bHLH35-like isoform X2
TrEMBLM8BV110.0M8BV11_AEGTA; Transcription factor bHLH35
STRINGEMT067470.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP104438133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.39e-44bHLH family protein