PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT07070
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 179aa    MW: 20493 Da    PI: 9.9184
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT07070genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM33.41.4e-101391576
       NAM  5 frFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk.......kvkaeekewyfFskrdkkyat.gkrknr 76
              +r +Pt+ e v++yL + ++g++l+ ++  i++v+i  +eP+dL +       +v  ++ + +fF+ ++++ ++  +r++r
  EMT07070 13 YRLSPTEVEAVTYYLPRLLSGETLHGADKlIHRVEISGCEPKDLAAryapapqAV--SSGDRFFFTVQEQEREQaPERARR 91
              6899*******************7776666**************85355543211..334678888877766541334443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.35E-71384IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MEGLDVDDVF HHYRLSPTEV EAVTYYLPRL LSGETLHGAD KLIHRVEISG CEPKDLAARY  60
APAPQAVSSG DRFFFTVQEQ EREQAPERAR RRRRHLEHPE DHGDLPRGMQ GRRGQEPLLQ  120
EEGQVDRLGH GGIPVPAAGG HRLRRGEGVP ARCTWLSMPL TRPDRNRRRT SFKKRNQRP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3732720.0AK373272.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv3025L12.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLM8B0E21e-127M8B0E2_AEGTA; Uncharacterized protein
STRINGEMT070701e-127(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18322799