PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT07186
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family C2H2
Protein Properties Length: 121aa    MW: 13372.6 Da    PI: 8.7154
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT07186genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.72e-053052123
              EEETTTTEEESSHHHHHHHHHHT CS
   zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
              ++C++C+k F ++  L  H++ H
  EMT07186 30 FPCSYCDKKFYSSQALGGHQNAH 52
              89******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139123.0E-62954IPR007087Zinc finger, C2H2
SuperFamilySSF576679.24E-72957No hitNo description
PROSITE profilePS5015711.8633057IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.603.4E-43056IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE patternPS0002803252IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    Send to blast
MESNGGEGEG NIDLNLSLQR ASSPEWFGYF PCSYCDKKFY SSQALGGHQN AHKSERSAAK  60
RTRELAYTRR QGQVGQLGEA SRREKDPASN ATGSSSHRRA SPPEAARRDL INEEIDLSLK  120
L
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020193584.14e-85uncharacterized protein LOC109779381
TrEMBLA0A453J7T18e-84A0A453J7T1_AEGTS; Uncharacterized protein
TrEMBLM8AZL78e-84M8AZL7_AEGTA; Zinc finger protein 2
STRINGEMT071861e-84(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18336274
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57520.15e-15zinc finger protein 2