PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT07709
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 210aa    MW: 22817.8 Da    PI: 6.4204
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT07709genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.82e-08134178655
               HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
               +++ r RR+ri ++ +eL +l+P         Kl+ ae+L++A +++k Lq
  EMT07709 134 SAAARERRRRISEKTAELSRLIPGgH------KLNTAEMLQEAARHVKLLQ 178
               5677999999*************955......****************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.652128177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.5E-9132185IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.49E-11132188IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-9134183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.2E-6134178IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.22E-5144181No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MSMAPLSFRP TPTARPLFHC FHDGADRDVS FLQDVHPDVG DALLGFVYDP LDPAVNAGLD  60
EFLNIPPYAS DEDDEEGGPR RPVRLHGGGR KPRPEVGQCL HAAGAGVPPR VYPPFVRGAD  120
AKKLQAAGNG SSQSAAARER RRRISEKTAE LSRLIPGGHK LNTAEMLQEA ARHVKLLQAQ  180
VGMLTLLNNI EDEKVPAMAQ EHMHALLESD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010239355.11e-68uncharacterized protein LOC104585091
TrEMBLM8BLR41e-151M8BLR4_AEGTA; Uncharacterized protein
STRINGEMT077091e-152(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62013051
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34820.12e-14bHLH family protein