PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT08764
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family B3
Protein Properties Length: 291aa    MW: 32274 Da    PI: 5.7793
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT08764genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.16.3e-132312874299
               TS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
        B3  42 sgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
               ++r+W+ +l  ++k +++ + +GW +F+  n+L+egD+++Fkl+++ +  +++v ++r+
  EMT08764 231 ESRTWDTEL--QRKTDHTAIVEGWASFAGGNRLQEGDICLFKLMESeEPLKMMVYIIRA 287
               569******..99*9****************************9888********9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF813833.01E-96108IPR001810F-box domain
Gene3DG3DSA:1.20.1280.506.8E-6739No hitNo description
SMARTSM002561.2E-5847IPR001810F-box domain
PfamPF006465.4E-6840IPR001810F-box domain
CDDcd100173.28E-9228286No hitNo description
PfamPF023621.1E-10230287IPR003340B3 DNA binding domain
PROSITE profilePS5086311.237231288IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.103.4E-10231289IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019364.71E-10232290IPR015300DNA-binding pseudobarrel domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MAPDPAVLPG DVLAEILRRL APHSLATSRL VCSAWRDTID ARLRAHLLPC SMRGIFINFT  60
RLRFSEFFSR PTTGPAICGG LDFLPCMGVS VMDHCNGLLL CCGLRHDNAL PRDYVVNPAT  120
RRWARLPQHP RPHMPGSDES AYLAFEPGVS PHYEVVLIPL VLSAGVSNDD ALLGSEWPPA  180
SYVIDVFSSV TRWWDKMTFV REGETKMTFV HLEPGSAPAP GHGDNGALEG ESRTWDTELQ  240
RKTDHTAIVE GWASFAGGNR LQEGDICLFK LMESEEPLKM MVYIIRAEEC T
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020194777.14e-90uncharacterized protein LOC109780608
TrEMBLM8BPT30.0M8BPT3_AEGTA; Uncharacterized protein
STRINGEMT087640.0(Aegilops tauschii)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.11e-06B3 family protein