PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT08832
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family C2H2
Protein Properties Length: 135aa    MW: 14595.7 Da    PI: 10.5336
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT08832genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.88e-054163123
              EEETTTTEEESSHHHHHHHHHHT CS
   zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
              ++C+ Cg+sF++   L  H  +H
  EMT08832 41 FVCKTCGRSFPSFQALGGHRTSH 63
              89**********99998888777 PP
2zf-C2H213.40.0002393115123
               EEETTTTEEESSHHHHHHHHHHT CS
   zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
               ++C+ Cg  F     L  H+r+H
  EMT08832  93 HQCHVCGLEFEMGQALGGHMRRH 115
               79********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003550.0864163IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.454168IPR007087Zinc finger, C2H2
SuperFamilySSF576673.0E-841115No hitNo description
PfamPF139121.3E-114165IPR007087Zinc finger, C2H2
PROSITE patternPS0002804363IPR007087Zinc finger, C2H2
PfamPF139122.7E-1192118IPR007087Zinc finger, C2H2
SMARTSM003550.2493115IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.84793120IPR007087Zinc finger, C2H2
PROSITE patternPS00028095115IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    Send to blast
MKQQYRDQAA GVPMSLSLSL SLGAMADRSK KMRRGGVDGE FVCKTCGRSF PSFQALGGHR  60
TSHLRGRNGL ALGLAAGYDQ PATKKTTDQK RAHQCHVCGL EFEMGQALGG HMRRHRDEAA  120
ATTAQAPPVL LQLFV
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in stress responses. {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat stress. {ECO:0000269|PubMed:18201973}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU2535541e-108EU253554.1 Triticum aestivum C2H2 zinc finger protein (ZFP2) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020198418.11e-95zinc finger protein ZAT8-like
SwissprotQ9LX855e-21ZAT8_ARATH; Zinc finger protein ZAT8
TrEMBLA0A453M9683e-94A0A453M968_AEGTS; Uncharacterized protein
STRINGEMT088327e-95(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP130530117
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46080.19e-23C2H2 family protein