PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT08834
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family C2H2
Protein Properties Length: 129aa    MW: 14140.3 Da    PI: 10.3996
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT08834genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.000143658123
              EEETTTTEEESSHHHHHHHHHHT CS
   zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
              ++C+ Cg+sF++   L  H  +H
  EMT08834 36 FVCKTCGRSFPSFQALGGHRTSH 58
              89**********99998888777 PP
2zf-C2H213.80.0001787109123
               EEETTTTEEESSHHHHHHHHHHT CS
   zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
               ++C++Cg  F     L  H+r+H
  EMT08834  87 HQCHICGLEFELGQALGGHMRRH 109
               79********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576673.16E-736109No hitNo description
PROSITE profilePS5015710.4083663IPR007087Zinc finger, C2H2
SMARTSM003550.0863658IPR015880Zinc finger, C2H2-like
PfamPF139121.2E-113660IPR007087Zinc finger, C2H2
PROSITE patternPS0002803858IPR007087Zinc finger, C2H2
PfamPF139121.4E-986112IPR007087Zinc finger, C2H2
SMARTSM003550.2287109IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.49487114IPR007087Zinc finger, C2H2
PROSITE patternPS00028089109IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    Send to blast
MKHCRDQAEV PLSLSLSLGV VADRNKKMRR SADGEFVCKT CGRSFPSFQA LGGHRTSHLR  60
GRHGLALSLA QGSEPATKKA TKQNLAHQCH ICGLEFELGQ ALGGHMRRHR EQEATTMAQA  120
PPVLLQLFV
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in stress responses. {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat stress. {ECO:0000269|PubMed:18201973}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020198420.11e-90zinc finger protein ZAT8-like
SwissprotQ9LX853e-20ZAT8_ARATH; Zinc finger protein ZAT8
TrEMBLA0A453M9N42e-89A0A453M9N4_AEGTS; Uncharacterized protein
STRINGTraes_5DL_F269EF70D.16e-90(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP130530117
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46080.11e-22C2H2 family protein