PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT10166
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 131aa    MW: 14524.5 Da    PI: 9.6933
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT10166genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.83e-3059117259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               +D y+WrKYGqK++kgs++pr+YYrC+s  +Cp++k+ver++ d  ++++tYe++Hnh 
  EMT10166  59 SDSYSWRKYGQKPIKGSPHPRGYYRCSSIkDCPARKHVERCRGDAGMLIVTYENDHNHA 117
               69************************9988****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105332.6E-141456IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.801.6E-3347119IPR003657WRKY domain
PROSITE profilePS5081130.27453119IPR003657WRKY domain
SuperFamilySSF1182903.27E-2756119IPR003657WRKY domain
SMARTSM007741.9E-3558118IPR003657WRKY domain
PfamPF031061.3E-2560116IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    Send to blast
MSSQLISMSE TSACAPASRK AAHKADDDGK CHCPKKKKPR EKRVVRMPAV SDKVADIPSD  60
SYSWRKYGQK PIKGSPHPRG YYRCSSIKDC PARKHVERCR GDAGMLIVTY ENDHNHAQPL  120
DLATLTANSE A
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-2246119274WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3700430.0AK370043.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2104B06.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020156284.11e-91probable WRKY transcription factor 15
SwissprotQ9STX04e-48WRKY7_ARATH; Probable WRKY transcription factor 7
TrEMBLA0A453M3F83e-90A0A453M3F8_AEGTS; Uncharacterized protein
TrEMBLM8B8487e-92M8B848_AEGTA; Putative WRKY transcription factor 7
STRINGEMT101661e-92(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP127053036
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.15e-43WRKY DNA-binding protein 7