PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT10296
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 369aa    MW: 41161.5 Da    PI: 6.3544
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT10296genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.83.9e-08147210355
               HHHHHHHHHHHHHHHHHHHHHHCTSCCC..............TTS-STCHHHHHHHHHHHHHHH CS
       HLH   3 rahnerErrRRdriNsafeeLrellPkas...........kapskKlsKaeiLekAveYIksLq 55 
                +h+ +Er RR++i +++  L++l+P +              ++    Ka +L + ++Y++sLq
  EMT10296 147 NSHSLAERLRRKKISERMKLLQDLVPGCNkvtffflaqelLCDQLITGKAVMLDEIINYVQSLQ 210
               58*************************877********9877888899**************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474598.9E-14142226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.16E-8142214No hitNo description
Gene3DG3DSA:4.10.280.101.1E-13144226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.316144209IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-5147210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.1E-7150215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    Send to blast
MYSGQQSDQG PAANSGKEFL EGNWGSEAMH QKMGYDSGAY GFQAYGMELE ERPGTFSQNI  60
QMSDEHSGGV KKRKGTDDCI ALLNPSASSK NVGDQQAEVS SQPERNSVER DNRKISPKTQ  120
SKEDSSDGDG TKENYVHFRA KRGQATNSHS LAERLRRKKI SERMKLLQDL VPGCNKVTFF  180
FLAQELLCDQ LITGKAVMLD EIINYVQSLQ RQVEFLSMKL ATVNPELGFD IEQILSKQMM  240
LSQDRRLGFY GADPGSSALI AHFNQGMMHP DMMCNASNPA GALHGTIHDI SMMNQMPEMW  300
ETLQNIPHMN FNPAVAADSS TNNAEMFLLY SAGPMKIEHV NQEIGKVENL RRLLSLWKVI  360
SYQFKTGVA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3641800.0AK364180.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2022H02.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020198221.10.0transcription factor bHLH49-like
RefseqXP_020198222.10.0transcription factor bHLH49-like
RefseqXP_020198223.10.0transcription factor bHLH49-like
TrEMBLM8B8K00.0M8B8K0_AEGTA; Transcription factor bHLH74
STRINGEMT102960.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP60333650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.12e-51bHLH family protein