PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT11209
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family GeBP
Protein Properties Length: 451aa    MW: 50007.3 Da    PI: 4.254
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT11209genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57340.95.7e-13266354397
    DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkv.sksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
               f+r+ws +D++ +L +l   ++++g+ p++  da+++ + ++++ ++   ++l  K+  LK++++  +k+     +  +skehd+++++lsk +Wg
  EMT11209 266 FSRIWSTDDDVRILEALAVHQKQHGTLPQS--DALVDALAGKLDNRAyGPKELKVKVGTLKRRYHALSKR-----SELLSKEHDRQVLDLSKTVWG 354
               89***********************87665..6899******9987615789*****************9.....6689****************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.7E-18266354IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    Send to blast
MAAPPPPPPP PPASSEETGS RSSSEESEDA IADSPPSANT RVPPHKGEED DESDEEEQDE  60
SDEEEEEPAH AGPTAAPTPK YQPPPQQQRE GSESSDDEEE EEEEEPAQAA LPPSPKKRPQ  120
QKESSQSSDD EEEEEEEEPA QAAPPSSPKK QPPPQQIEEE GESEEEEFEE QEPAHAAPTA  180
APTPKYQPPP QQQREGSESS DDEEEEEEEE EPTQAAPPSA PKKRPPPQQI DEEEEEGASE  240
EEAPPKLAPK QAPEGVKTKT KKPAVFSRIW STDDDVRILE ALAVHQKQHG TLPQSDALVD  300
ALAGKLDNRA YGPKELKVKV GTLKRRYHAL SKRSELLSKE HDRQVLDLSK TVWGGDKSTA  360
AAASVKTTAN GHKRKSFEEM CELYPYLAED VKELMVENPG MFKSDFGKMD HEKARVMNEK  420
IKRQRVAQMK LGLRRHDLIR EVTKTIIDLV D
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1419424KIKRQR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020181583.11e-176ABC transporter F family member 4-like
TrEMBLM8BWM40.0M8BWM4_AEGTA; Uncharacterized protein
STRINGEMT112090.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP67292737
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.11e-08DNA-binding storekeeper protein-related transcriptional regulator