PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT12774
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family G2-like
Protein Properties Length: 573aa    MW: 63740.1 Da    PI: 4.5815
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT12774genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like50.25.6e-16136186555
   G2-like   5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkg..LtlehvkSHLQkYRl 55 
                W++eLHe+F++ave LG    A  ++i + m+ k+  Lt++hv+SHLQk+Rl
  EMT12774 136 LWSSELHEKFLQAVEVLGA--SAMAQNIHQYMNAKDlnLTIQHVASHLQKHRL 186
               5****************54..47889********973369************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466896.99E-10135190IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.6E-15136190IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-13137187IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 573 aa     Download sequence    Send to blast
MAVNLSSVSF LPFETVEEAL DSLKRGVAKN EELDLVVAEV HPGNAEMDTL VLFHHILNAL  60
KVPLITMCAY DEAVSTRLTL GTCFNVVKPL DTETVNFLRM RALQHRSIKN HRSETEDEKQ  120
DALNANVYSE NLGWFLWSSE LHEKFLQAVE VLGASAMAQN IHQYMNAKDL NLTIQHVASH  180
LQKHRLRAQR QRLSHDEEGY QHYARMKELS EMMSSAYKAP SAKPNNHLAT TQTQFTHGVA  240
SSIWDKYPGM VWPHMEGSSA ASAMWYSYPG KRWGQVGESS AGARVSQTNA RPPPVLIHGT  300
KSIWDWYQES LQHYNESLSY KREVLPVQSK ALDGYGREIF INLEREEISL TETAGKIVIN  360
LESDDMQKDT NDDVHAAVTP QEDTMNEVHA AVTLQKDTMD EAHAAVTPHE VNEVPAAAMG  420
AGYLVDLAGN ALLDGIDNYH PAAENAQSEP FSDWDWKEVE KFLTNQMEGQ GQEQQGLELV  480
DLLQVDGISP EELLQVDEAW NQALQQANPA NVVEDEPMAE EPAAGDAPVS DPANQSGVAD  540
NVFGVWSPQF AATTTACRSR PARRGATQEL LLF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020157240.10.0uncharacterized protein LOC109742553
TrEMBLR7W6Z90.0R7W6Z9_AEGTA; Putative two-component response regulator ARR20
STRINGEMT127740.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP130171928
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.12e-09response regulator 2