PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT12817
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family GeBP
Protein Properties Length: 227aa    MW: 25017 Da    PI: 8.9763
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT12817genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57340.29.4e-1328725397
    DUF573 53 qlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97
               l++K+rrLK+K++   ++ak+g+e++++++hd++i+e++kk+Wg
  EMT12817 28 SLSDKVRRLKQKYQLLATRAKNGREQELHTPHDRSIYEHAKKVWG 72
              699*****************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.6E-112772IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    Send to blast
MATSFSSCAA SPHTAPRAAC SLVPPMTSLS DKVRRLKQKY QLLATRAKNG REQELHTPHD  60
RSIYEHAKKV WGLVGSGGGD GGGSGYENYG GGDSDELQYS GDSDDDMESQ RDDRYHIKNR  120
KVRPITAANG NGIGLGAVNA NGRGKSGLEK GKDAYPYLWE TVEELSKEHP SGAAFKKAFE  180
VLEGSKARAI EEKLRRFRLT EIRQQLRRMD LMKETVRMVL DALESAD
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3705900.0AK370590.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2112N22.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020169455.11e-135STOREKEEPER protein-like
TrEMBLN1QUN81e-167N1QUN8_AEGTA; Uncharacterized protein
STRINGEMT128171e-168(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26713587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.15e-07DNA-binding storekeeper protein-related transcriptional regulator