PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT13369
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 299aa    MW: 31403.7 Da    PI: 6.8632
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT13369genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY68.97.5e-22110170259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                Dg+ WrKYGqKe+++s++prsYYrCt++   gC++k++ + +++ p   ++tY geH+++
  EMT13369 110 VDGHIWRKYGQKEIQNSTHPRSYYRCTHKsdqGCNAKRQAQICETHPIKYDVTYYGEHTCK 170
               59**************************99999**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081120.507104172IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.8E-24105172IPR003657WRKY domain
SuperFamilySSF1182901.09E-22107172IPR003657WRKY domain
SMARTSM007742.1E-31109171IPR003657WRKY domain
PfamPF031065.4E-22111170IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MASSGSAGRD VPAARAVNDL IEAREGATRL KGMLQEQSSE LTELMDGMLN KLSSALSALD  60
TGCTAGASAS GSADGVIRAR AESSTGRTRK RSFSRRLEGF SGKRVTDTLV DGHIWRKYGQ  120
KEIQNSTHPR SYYRCTHKSD QGCNAKRQAQ ICETHPIKYD VTYYGEHTCK PPSNTPMIIA  180
AASDDRAENL VSFAPTFPQL GQATTQLSSS WCTSVDDVFS SSSDPFVQAH ELAAVVGSAG  240
RTSSTVGSVP DHSGRGIGDM AGGGQGGGTG SFPSSPSSLG FVVGSLGSIG NDDFFLFDP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A3e-26105170469OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKR8273980.0KR827398.1 Triticum aestivum WRKY47 transcriptional factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020185911.10.0probable WRKY transcription factor 64
TrEMBLR7W7P00.0R7W7P0_AEGTA; Putative WRKY transcription factor 70
STRINGEMT133690.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP139812526
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.13e-24WRKY DNA-binding protein 70