PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT13499
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 191aa    MW: 20563.4 Da    PI: 8.4939
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT13499genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH201.2e-061351655
              HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH 16 iNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
              +++++ eLr l+P+      +K++Ka+i   Av Y+k+Lq
  EMT13499  1 MKEKLYELRALVPNI-----TKMDKASIIADAVAYVKNLQ 35
              678999********7.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.4E-10151IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.62E-7135No hitNo description
SuperFamilySSF474594.32E-10152IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.004134IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0034756Biological Processregulation of iron ion transport
GO:0071281Biological Processcellular response to iron ion
GO:0071369Biological Processcellular response to ethylene stimulus
GO:0071732Biological Processcellular response to nitric oxide
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MKEKLYELRA LVPNITKMDK ASIIADAVAY VKNLQSHARK LKEDVATLEA RPGLAGRRQQ  60
QQQKQGRRQG QHGRNGGDDE GNSGSSRGGG GARVTLVSAA QVGEGRFFVT VECERRDGVA  120
APLCAAVEAL AGFLVESSNL GCSSDRVVST LTLKVCETRE DVMISDRTVK LWVMAALLSE  180
GFRPEATSEI C
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020152884.11e-108transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR-like
TrEMBLR7W7U31e-137R7W7U3_AEGTA; Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR
STRINGEMT134991e-137(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP55463057
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.14e-24FER-like regulator of iron uptake