PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT13569
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family FAR1
Protein Properties Length: 846aa    MW: 94332.6 Da    PI: 4.8313
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT13569genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR163.84.8e-20614706190
      FAR1   1 kfYneYAkevGFsvrkskskkskr.ngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
               +fYn+YA+e GFsvrk++ k+sk  +g+   r++ C + gkre +  + + ++rr r etr+ C+a++++k +k +++w+v++++ +H+H la
  EMT13569 614 NFYNQYAYERGFSVRKDSLKYSKGpEGTKRLRKYLCARAGKREAKLCTmEGRTRRLRGETRCFCDAHITLKFDKeRDVWYVSSFSDDHSHVLA 706
               6*****************99996416677789************9998667888999**************9999***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF128196.6E-95298IPR024788Malectin-like carbohydrate-binding domain
PfamPF128192.6E-51122309IPR024788Malectin-like carbohydrate-binding domain
SuperFamilySSF520581.08E-11389449IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.101.7E-11389448IPR032675Leucine-rich repeat domain, L domain-like
PfamPF138558.1E-8394448IPR001611Leucine-rich repeat
PROSITE profilePS514507.019418441IPR001611Leucine-rich repeat
PfamPF031015.0E-18614706IPR004330FAR1 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0016310Biological Processphosphorylation
GO:0005515Molecular Functionprotein binding
GO:0016301Molecular Functionkinase activity
Sequence ? help Back to Top
Protein Sequence    Length: 846 aa     Download sequence    Send to blast
MAAPWLLLLL CVAGGVPRVR CQSAPDSTGI ELQHLAGKGS SIMSMLSGFI SIDCGLSEQS  60
SYVDDATELA YTSDAGFIDA GSNYNVSVEY IDQSHWSPRS LPRPPGAARL LPPPVLRGGD  120
VQPPIFDLYL GVNFWKTVNI SRPDAVHVAE VIAVVPDDSL QVCLVNTRSG TPFISSLELR  180
PLKDTLYPQA NATQGLVLLG RHNFGAADLI RYPNDTYDRA WTPYTNPEDQ WTTILTSSRV  240
AMEVEDRKPL YDVPSVVMQT AVRPSNTTRN VMWFPWDAEP NHVYPMPGLL PVFYLAELET  300
VDSKQERRLL GAANATTLRP IMEINSTILP PFINAAELFT PISTAGTDAQ DVSAITAIKA  360
KYQLIKNWVG DPCAPKNLVG DGLNCSYPIS RPQRITSVNM SFGGLSGDIS SYFANLKAIQ  420
YLDLSHNNLT GSIPDGLSQL PSLVLLNVTP SSRSSSEKMD PAEILAAVQE LEEEGDYDGD  480
DYGEDKETSS LNMDEPAEEN YISLDESYNG NRHGDDDDDM DIDDSFAESA LRMDEDGDFV  540
RNIVDDESDK SHVDASHDDS SSKGDVDATS GKDEHVGDDL FNFDIGFDEY QQESLDMHWK  600
VMRKTFKSLG EAYNFYNQYA YERGFSVRKD SLKYSKGPEG TKRLRKYLCA RAGKREAKLC  660
TMEGRTRRLR GETRCFCDAH ITLKFDKERD VWYVSSFSDD HSHVLARPDE VTFLRSHNQI  720
KEYQKAEILT MAGAGIRKHM IYDQLVSRYG SYAKAGFGRK KLYNMCYREK MKLLAQGDAD  780
TAIGIMMTRR ERDPDFFFEH TVDAGGRCRR SSLTSDWPAH LSGYFFKRKT KNVGVTSDGG  840
SAEKQQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020201636.10.0probable LRR receptor-like serine/threonine-protein kinase At1g51820
TrEMBLR7W7Y80.0R7W7Y8_AEGTA; Putative LRR receptor-like serine/threonine-protein kinase
STRINGEMT135690.0(Aegilops tauschii)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-14FAR1-related sequence 5