PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT13581
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 283aa    MW: 30789.8 Da    PI: 4.8648
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT13581genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.48e-1167116255
               HHHHHHH.HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   2 rrahner.ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               r+++n++ Er RR+r+N+++  +r ++P+      +K++Ka+i + Av YI +Lq
  EMT13581  67 RASKNIVeERVRRRRLNEKLYAIRGVVPNI-----TKMDKASIIQDAVAYIEELQ 116
               55556552799******************7.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.102.2E-1364130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.31E-1464127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.81166115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.3E-867116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.8E-1172121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.34E-782119No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MEADMDASLD FLELEAHLVF DLGNADSSYL PAEDSLSGLD SSGYNDSTSS PDGATSSRST  60
ASTRATRASK NIVEERVRRR RLNEKLYAIR GVVPNITKMD KASIIQDAVA YIEELQEQEC  120
RILAEVSDLE AGGCTAVVKS AASTGSEGVE DTGVGFSPRK KMRRTTSSSS INDAVTSPAT  180
HPVLLELEVM PIAEKLAVVS MRHDNAQHVM AKIYKALDSL RLKVINSSVT VVDGRTVHTM  240
FIEVLGETSR WDLKMPALKD LDMIFGLVVG VHFRSFDLAD FVS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHE9962561e-102HE996256.1 Triticum aestivum cv. Arina SNP, chromosome 3B, clone Taes_arina_ctg_12674.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020186745.11e-164transcription factor bHLH35-like
TrEMBLN1QW460.0N1QW46_AEGTA; Transcription factor bHLH35
STRINGEMT135810.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP104438133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.26e-29bHLH family protein