PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT13755
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family C2H2
Protein Properties Length: 685aa    MW: 73851.2 Da    PI: 5.136
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT13755genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.70.00039126147223
               EETTTTEEESSHHHHHHHHHHT CS
   zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
               +Cp Cgk F++  ++  H+r+H
  EMT13755 126 QCPECGKLFRNDKSMFGHLRSH 147
               7*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5015710.284125152IPR007087Zinc finger, C2H2
SMARTSM003550.013125147IPR015880Zinc finger, C2H2-like
SuperFamilySSF576672.56E-6126147No hitNo description
PfamPF139120.0015126147IPR007087Zinc finger, C2H2
PROSITE patternPS000280127147IPR007087Zinc finger, C2H2
SuperFamilySSF576672.56E-6519546No hitNo description
PfamPF139123.3E-8524547IPR007087Zinc finger, C2H2
SMARTSM003550.026524546IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.097524551IPR007087Zinc finger, C2H2
PROSITE patternPS000280526546IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 685 aa     Download sequence    Send to blast
MSSNAGDELS SLPAAPAAAF TQEGSTAPAA AFTQEGFTAP ADAFTQEGFL GDEAFSSGDR  60
YPKEDEDELL SGDGYARDPD RSVEEEGPLG EEEEDGDDLL LSVKQGAQVE PSRNNSEEHW  120
SSADVQCPEC GKLFRNDKSM FGHLRSHPNR GYKKGSGHIK SRPSKGYKPP ARPKPLPSRN  180
GKLSPLPIRN GELSPLPSRN GNLSPLPSRN GNLSPPANDS TRVARYSQRD PELSRFEVMM  240
AYVMLTLKQR GDGVAQDQSH KRKHESSELD VPEEDLVRNK AGDGVVLGNK HGTSVVEMLG  300
DAVVHRSEQG SSLVEMAVDD AVLGDKHGTS VAEMPGDDAV HRSEQGSSLV EMAVDDVVLG  360
DKHGTSVAEM PGDDAVYRSE GGSSLAEMAG ADMVLPNEHH GSVAVMAEDD VVHRSEQGSS  420
LAEMAGDDVE LGDKHGTSVA EMPDDDAVHR SEQGSSLAEM AGDDVVLPNE HHGSVAVMAG  480
DAVVRNEHGS VEVPRKKGRK KSKESTEARR KEKVPSASTV KRSYTCKQCK AEFPTHQALG  540
GHMAAHNKDK RIQAQNEQAA AAWEAQQNQI DRSLNRLVTS SMKPAWEAHQ SQKGQNLNRQ  600
ETKGGGEEPR QGGGMFMSTR ELLMERYTKL FNQGWLSRQE AGGSSKRQHT ENKDGGSPSI  660
APPLADGGRR RPFDIDLNAM APEKE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1494510RKKGRKKSKESTEARRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLR7W6W60.0R7W6W6_AEGTA; Uncharacterized protein
STRINGEMT137550.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2082455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.15e-06zinc-finger protein 10