PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT15454
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 366aa    MW: 38651 Da    PI: 7.4175
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT15454genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.81.7e-12260305655
               HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               +++Er RR ri +++ +L++l+P+     +k  s +++L +Ave+Ik Lq
  EMT15454 260 SIAERERRTRISDKLRKLQDLVPNM----DKQTSTSDMLDLAVEHIKGLQ 305
               689*********************7....688*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.361254304IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.67E-16257319IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.88E-13258309No hitNo description
Gene3DG3DSA:4.10.280.102.7E-13259319IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.8E-10260305IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.9E-13260310IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    Send to blast
MRRFLPAGVG EPSSSSSSGP HGKHEGSEAA AAGGGLRYGG GDISLGRGND LLHGQFRGGE  60
GEMKDDGADM LARHSSSPAG FFSNLMVDDG WKFWSWPSLT QQGGEGYHGS RGAGVAGGSS  120
GGEAHRHASS STKMKSQLSF TAGGQQTTAH LSRISEGASL FPSADAVRAA AHSGSEHPVS  180
RSFSASGSSG GFSIVGPWDE SREIIGTLDL GGYESQFSGM ASSSSLELAG MDKYMQAQQQ  240
QDQVAFKVRA KRGCATHPRS IAERERRTRI SDKLRKLQDL VPNMDKQTST SDMLDLAVEH  300
IKGLQSQLQC MPMLNEYMEL NGSYFIQGGK ELAAVLMDPS TCSQSLAIII LKQVASRSAI  360
GSLRSI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2499540.0AK249954.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf51f14, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020165844.11e-162transcription factor bHLH128-like
TrEMBLR7WB730.0R7WB73_AEGTA; Transcription factor bHLH128
STRINGEMT154540.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP115313141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.13e-37bHLH family protein