PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT16206
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family C2H2
Protein Properties Length: 128aa    MW: 14296.3 Da    PI: 9.1432
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT16206genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.45.4e-055577123
              EEETTTTEEESSHHHHHHHHHHT CS
   zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
              ++C+ C+++F++   L  H+ +H
  EMT16206 55 FECKTCNRRFPSFQALGEHQASH 77
              89******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576672.24E-65181No hitNo description
PfamPF139129.3E-125479IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.4085582IPR007087Zinc finger, C2H2
PROSITE patternPS0002805777IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    Send to blast
MAHGKRSRQQ AETTSVSLMD LDGGDMARIL MIFSGHHNTH GHHDVAGPAS PERVFECKTC  60
NRRFPSFQAL GEHQASHKKP RLADGEPPKP KWPLLADARR CCYYVAVVLL PVRRGATTDA  120
WPCCNQHK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010228788.13e-38zinc finger protein ZAT11
TrEMBLN1QXA55e-92N1QXA5_AEGTA; Uncharacterized protein
STRINGEMT162069e-93(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50137157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.16e-13C2H2 family protein