PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EMT16461

Organism

Aegilops tauschii

Taxonomic ID

37682

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops

Family

bHLH

Protein Properties

Length: 206aa MW: 21697.2 Da PI: 8.5935

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EMT16461	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.7	0.00048	158	196	11	54
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +R +++ +++ L++l+ + +K + a++L +A +I++L EMT16461 158 KRSQKLGDKITALQQLVSPY-----GKTDTASVLHEAAACIRNL 196 7899999********999.....9**************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	9.642	147	196	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	1.14E-7	158	203	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	8.6E-5	158	202	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence Send to blast
MWNCSAPSPL LLPFSDDYVK CESSSSAPGS AGFDGIRIAA DYGHLCHHMS SLQSLPAPAL 60 FATRSSESYF GMGDGSAYGG DGRPAAFMHF GYAQTQPPTA ATHPVRWTAA GGESEPVVCD 120 GSSFSGSKRR KTTTTDSRLQ GSNAKPRNTT AAAKAPCKRS QKLGDKITAL QQLVSPYGKT 180 DTASVLHEAA ACIRNLHDQI QVTAAR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020180445.1	1e-149	transcription factor bHLH123-like
TrEMBL	R7W639	1e-151	R7W639_AEGTA; Transcription factor bHLH113
STRING	EMT16461	1e-152	(Aegilops tauschii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3758	24	26

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19500.1	2e-15	bHLH family protein