PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT16739
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 316aa    MW: 33262.6 Da    PI: 7.1157
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT16739genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.94.1e-14153199455
               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                h ++Er+RR++iN++f eL  ++P +     kK++K +iL  A++Y+k+Lq
  EMT16739 153 DHIMAERKRREKINQRFIELSAVIPGL-----KKMDKGTILADATRYVKELQ 199
               699************************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.243149198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-11153199IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.9E-18153207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.09E-16153208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.13E-15154203No hitNo description
SMARTSM003539.7E-14155204IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MDDSRLFMQW AVSTLQQQDP GGAGGGSEKS AGFPCLQALR DSSELTEAQN SLSSGDDTGG  60
GGGIITPAPD LAVHQGSWSM SSPTSGGPFA PSSMSGTSTS NALSMSWDFG AALPPQPVSS  120
GGGGTLAAGA PLRSGVSQPT RRASTKSTPY AQDHIMAERK RREKINQRFI ELSAVIPGLK  180
KMDKGTILAD ATRYVKELQE RVKYLEAAGG NRRSVETVVL VRKPRCLVTP DGEACPGFFS  240
AAGTPAIGSQ LPEIEAKLSE DNVMVRIHCE INGKGLLARV LAEVEELHLR IVHNDVMPFT  300
ASTVIITTMA KASSHQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1157162ERKRRE
2158163RKRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020181335.10.0transcription factor NAI1-like
TrEMBLN1QXZ30.0N1QXZ3_AEGTA; Transcription factor bHLH25
STRINGEMT167390.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP92731143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.16e-34bHLH family protein