PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT18001
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bZIP
Protein Properties Length: 176aa    MW: 19242.3 Da    PI: 9.6043
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT18001genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1377.5e-1281128552
               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
               +++rr+++NRe+ArrsR RK+ +++eL  +++ L a N++L  el++ 
  EMT18001  81 RKTRRLASNRESARRSRVRKQRRLDELSSRAARLRAANQRLLVELNRV 128
               689***************************************999985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.3E-1077141IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.1E-878131No hitNo description
PROSITE profilePS5021710.7679142IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.76E-881130No hitNo description
PfamPF001704.2E-981127IPR004827Basic-leucine zipper domain
PROSITE patternPS0003608499IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MQRHGAACSI ACHHGAGVFV LPQVYDPRAT HGQYDLASLS DMVAPYTDYN GGNPAVGWAP  60
PEVDSVDDDG RAARRGNGDE RKTRRLASNR ESARRSRVRK QRRLDELSSR AARLRAANQR  120
LLVELNRVLA EHGRVARESA RLREEASELR GKLDGMGVDE ADDVAPQSTK GTGNTA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19399RRSRVRK
293100RRSRVRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3658600.0AK365860.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2038F22.
GenBankAK3721470.0AK372147.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2147D05.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020164231.11e-125basic leucine zipper 43-like
TrEMBLA0A3B6QG431e-123A0A3B6QG43_WHEAT; Uncharacterized protein
TrEMBLA0A453NNW41e-123A0A453NNW4_AEGTS; Uncharacterized protein
TrEMBLR7W8671e-123R7W867_AEGTA; Ocs element-binding factor 1
STRINGEMT180011e-124(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP127422735