PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT18044
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family EIL
Protein Properties Length: 445aa    MW: 49381.2 Da    PI: 4.8658
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT18044genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3349.76.1e-107383282291
               XXXXXXXXXXXXXXXXXXXXXX..XXXXX.......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
      EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaa......tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWk 96 
               +lkkrmwkdq ll++l++   +   +  +         +k+ + ++ ++rrk+m raQDg+L++Ml++me+cna+GfvYgi++e+g pv+g+sdsLr+WWk
  EMT18044  38 DLKKRMWKDQLLLMKLEGSPGHDRRAIAQGpgtdlaQAEKEAEMPESRYRRKAMLRAQDGVLRHMLRMMEACNARGFVYGIVDETGMPVSGSSDSLRGWWK 138
               8***************99877754333333556663334444577889***************************************************** PP

               XXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT.--TT--.---- CS
      EIN3  97 ekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelg.lskdqgtppyk 196
               e+v f+r+gp+a++              l++ +ss  h l ++qD+tlgSLLsal+qhc+ppqr+fpl++g++pPWWPtG+e wwg +g ++++qg+ppy+
  EMT18044 139 EDVGFERTGPTALAGPS---------TALESPGSSFLHGLLDIQDSTLGSLLSALIQHCEPPQRSFPLDRGLPPPWWPTGQEVWWGLQGkTQAHQGPPPYR 230
               **************882.........2233357899*****************************************************99999******* PP

               -GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX..XXXX.XXXXXXXXXXXXXXXXXXXXXX CS
      EIN3 197 kphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss..slrk.qspkvtlsceqkedvegkkesk 291
               kphdlkkawk+s+L+avikh+sp+++++r+l++qsk+lq++msa++  ++++v+ qee++ ++v+   +   l + ++ + +   e+++d +++k+++
  EMT18044 231 KPHDLKKAWKISLLSAVIKHLSPRFDQMRKLVWQSKRLQHRMSARDAETWSRVITQEEALDRHVQRALRitPLDEeDDDDDKEPREAERDLHVDKRKR 328
               ***********************************************************999888775433333312222223333333333333333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048734.9E-11238288No hitNo description
Gene3DG3DSA:1.10.3180.107.3E-63162296IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.96E-55166290IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    Send to blast
MDRGKTKADP HAVAVAAKPD LQDDSESESD SESIEIADLK KRMWKDQLLL MKLEGSPGHD  60
RRAIAQGPGT DLAQAEKEAE MPESRYRRKA MLRAQDGVLR HMLRMMEACN ARGFVYGIVD  120
ETGMPVSGSS DSLRGWWKED VGFERTGPTA LAGPSTALES PGSSFLHGLL DIQDSTLGSL  180
LSALIQHCEP PQRSFPLDRG LPPPWWPTGQ EVWWGLQGKT QAHQGPPPYR KPHDLKKAWK  240
ISLLSAVIKH LSPRFDQMRK LVWQSKRLQH RMSARDAETW SRVITQEEAL DRHVQRALRI  300
TPLDEEDDDD DKEPREAERD LHVDKRKREV GNESAGGNVD SGSGRELVAL PGIDVVAEAD  360
RNSIDELMKM YYSCLQGTDG GEQEIKDVVA GGGEQSNTSC AETGVLDAAK VRDDMFDDFL  420
SVADVVDTSD FPGSPIWHRG SSDLD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A4e-481672944130Protein ETHYLENE INSENSITIVE 3
4zds_B4e-481672944130Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3738050.0AK373805.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3044B06.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020200713.10.0ETHYLENE INSENSITIVE 3-like 5 protein
SwissprotQ9FJQ57e-88EIL5_ARATH; ETHYLENE INSENSITIVE 3-like 5 protein
SwissprotQ9LX166e-88EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLR7WEL70.0R7WEL7_AEGTA; ETHYLENE INSENSITIVE 3-like 5 protein
STRINGEMT180440.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65100.15e-89EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]