PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT18117
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family Trihelix
Protein Properties Length: 444aa    MW: 50413.1 Da    PI: 6.5108
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT18117genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix77.22.5e-24122218186
  trihelix   1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt.sessstcpyfdqle 86 
               +Wt ++v++Li+a ++++e+ +++           +kk++W+++sk+m erg+++sp+qC++k+++lnkryk+++++ +++t ++++ + +++d ++
  EMT18117 122 KWTGSMVKLLITAASYTGEDPGADLgggrrnitvmQKKGKWKAISKVMGERGCNVSPQQCEDKFNDLNKRYKRLTDILGRGTaCNVVDNPALLDCMN 218
               7*********************8744455667777**********************************************5489988888888775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138374.0E-18120241No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    Send to blast
MDRSNLPPGN TTQGTPYGSL NVHGNSMQMH APSSGKHLFS QSQMPGSFTM PINRATEHDN  60
PGSGFQFVEH GKKDHQQQQQ QQQHNHLIKN SISDDEEHDM TEDATDAQSG KGKKGSAWHR  120
MKWTGSMVKL LITAASYTGE DPGADLGGGR RNITVMQKKG KWKAISKVMG ERGCNVSPQQ  180
CEDKFNDLNK RYKRLTDILG RGTACNVVDN PALLDCMNNL SDKMKEDARK ILNSKHLFYE  240
MMCSYHNNNR VNLPEDLALQ HSLQVALRCK EEHDQRRDAS GDAEEDDHSA DSDYEDHDEE  300
HQAVHHSMRD PSMNKRMCHA LDHGDAGFLT SSSNDGSGSL DPHGIALDIN KGFTDGTNLS  360
VVRKELASQA IELRKRRLQI EAQELEVTEQ RLKWERFKRK KDREIERMES ENEEMMLENK  420
RLELQLKHKE LEVELKLKGN PDHE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3712000.0AK371200.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2127P16.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020187300.10.0stress response protein NST1-like
TrEMBLA0A453A3K20.0A0A453A3K2_AEGTS; Uncharacterized protein
TrEMBLR7W8330.0R7W833_AEGTA; Uncharacterized protein
STRINGEMT181170.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP29203886
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21200.15e-87sequence-specific DNA binding transcription factors