PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT18161
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family CPP
Protein Properties Length: 317aa    MW: 34775.6 Da    PI: 7.5444
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT18161genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR26.21.7e-08143182342
       TCR   3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 
               +++C+C   kC++ YC+C  a+  C ++C C+dC N++++
  EMT18161 143 REPCHCASCKCQNHYCRCVRANLPCLDRCDCKDCGNTKTH 182
               689*********************************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5163412.18649181IPR005172CRC domain
SMARTSM011146.1E-4141182IPR033467Tesmin/TSO1-like CXC domain
PfamPF036386.8E-5144179IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MRIEKSLISA AMHIALDCTT TSSVAVMSQL QKCACANRNC FHEYVHNLTQ LECHEHDSSN  60
QLANFFVMYS DCACFTREGL CSEYCECRGD CKNIWKHEEE VTKEFAEYTK RKADEAAAQA  120
AAAQAAAQPQ PKPLPALEPG SAREPCHCAS CKCQNHYCRC VRANLPCLDR CDCKDCGNTK  180
THEEKLQDLG IKVEDLASGS TVMTRGKAQA VKESAVGCKC QSECASRCGC VRRNIKCTSK  240
CKCQPISPRL EQGVKGVLAA AAAPSSRQAN GQNALDDSRL ETYQSMMQVT LHTYHPQVTP  300
VQISPTVKHS QVPVDSL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020196775.11e-118protein lin-54-like
TrEMBLR7W8F40.0R7W8F4_AEGTA; Uncharacterized protein
STRINGEMT181610.0(Aegilops tauschii)