PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT18454
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 252aa    MW: 27010.2 Da    PI: 7.315
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT18454genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH291.9e-09163210455
               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               +h+ +Er RR+ri +++  L+el+P +    +k   Ka +L + ++Y++sLq
  EMT18454 163 SHSLAERVRRERISERMRYLQELVPGC----DKVTGKAGMLDEIINYVQSLQ 210
               8*************************9....555*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.39E-10157214No hitNo description
SuperFamilySSF474592.49E-15157215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.504159209IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.8E-15159215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.7E-7163210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.4E-9165215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009911Biological Processpositive regulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MAHCGGGPGP AAPREASSVE SHFQGLLDDD DKYRALCGAF GYLQQQEWPD LSGACYAAFG  60
APPPPGTSNG AGNSFSCSGS ASSGGGSTKR KPDAYVDAKL CQDDCKRPRG KQQLCDPDEA  120
GAAAKGRPEK AKACARKKPE PAAAGQKTDY IHVRARRGQA TDSHSLAERV RRERISERMR  180
YLQELVPGCD KVTGKAGMLD EIINYVQSLQ KQVEVNGAAA WDIASQHLFS GFDAQFQPVQ  240
SDCLLDNLKM EM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3602380.0AK360238.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1113K05.
GenBankAK3606200.0AK360620.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1122A07.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020200434.11e-139transcription factor bHLH137-like
TrEMBLR7WEZ80.0R7WEZ8_AEGTA; Transcription factor bHLH63
STRINGEMT184540.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP82523749
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18300.22e-30bHLH family protein