PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT19399
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 247aa    MW: 27696.1 Da    PI: 6.6219
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT19399genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY54.42.5e-17125190358
               -SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTE........EEEEEES--SS CS
      WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkv........veitYegeHnh 58 
               Dg++WrKYGqK+++g e++rsYYrC+++  +Cp++k +++++++ ++         +++Y g+H++
  EMT19399 125 DGHHWRKYGQKNINGREHTRSYYRCAYTerNCPATKTIQQQDHNITInceektakYIVVYYGHHTC 190
               9************************99888*********998775542222222257888888876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-20109190IPR003657WRKY domain
SuperFamilySSF1182901.83E-17117190IPR003657WRKY domain
SMARTSM007741.3E-22123192IPR003657WRKY domain
PROSITE profilePS5081115.422125169IPR003657WRKY domain
PfamPF031067.0E-21125190IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MKSSSTMVVN GGSEMDALFL LTRQQELLTQ LRALILPALR DADGRSADLA ISLFDDVIDC  60
IAGVMSRLEG ISTEAGGRRA GVDVITPNAG ERQEEKPTIS NVGQKRRRNN DKRSRSLITV  120
VPHYDGHHWR KYGQKNINGR EHTRSYYRCA YTERNCPATK TIQQQDHNIT INCEEKTAKY  180
IVVYYGHHTC CDDNTRNGAK NDPGMDLIQN GKMAGAVTEF QKFDPGDVDM PALIEVLDNP  240
ELNWDII
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU6696611e-38EU669661.1 Triticum aestivum WRKY31 gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020167912.11e-166probable WRKY transcription factor 70
TrEMBLA0A453ADW00.0A0A453ADW0_AEGTS; Uncharacterized protein
TrEMBLR7WFV30.0R7WFV3_AEGTA; Putative WRKY transcription factor 38
STRINGEMT193990.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP32583079
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22570.11e-13WRKY DNA-binding protein 38