PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT19490
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 181aa    MW: 19749.1 Da    PI: 4.9099
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT19490genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.73.1e-1161107455
               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               ++ ++Er RR+ +N+++  Lr+++P+      +K++Ka+i + A+ YI +Lq
  EMT19490  61 KNIINERHRRRMLNEKLYALRRIVPNI-----TKMDKASIIQDAIAYIEELQ 107
               57799*********************7.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.58E-1250111No hitNo description
PROSITE profilePS5088815.2557106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-1559114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.3E-961107IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.3E-1363112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.5E-1364112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MESDMDVSLD FSWEALVLEL GDADSMYLPA EDSLSGLHDD STSSPDGATS RSTKASSLER  60
KNIINERHRR RMLNEKLYAL RRIVPNITKM DKASIIQDAI AYIEELQEQE RQILAALGTD  120
SCTAVAKADD AASTGSNAED HGVGSSPRKK MRRTTSASSI NGAFSSPATH PVQILEVIIH  180
M
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3651950.0AK365195.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2031O06.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020177098.11e-127transcription factor bHLH35-like isoform X2
SwissprotQ2HIV99e-25BH035_ARATH; Transcription factor bHLH35
TrEMBLA0A453J9671e-129A0A453J967_AEGTS; Uncharacterized protein
TrEMBLN1R1341e-129N1R134_AEGTA; Transcription factor bHLH35
STRINGEMT194901e-130(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP104438133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.14e-23bHLH family protein