PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT19491
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 282aa    MW: 31365.6 Da    PI: 8.2926
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT19491genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.33.6e-052573552
              HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHH CS
       HLH  5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIk 52
              ++e E+ RR+r++   e+L +l+P   +  +   ++    L     YIk
  EMT19491 25 KKESEKERRKRMKALCEKLASLIPReHCCSSTDTMTQLGSLDVGASYIK 73
              6899********************9554233333444444444444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508888.552075IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-92588IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.22E-82688IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MKAKPARGGK RSRASGGTAV VLLEKKESEK ERRKRMKALC EKLASLIPRE HCCSSTDTMT  60
QLGSLDVGAS YIKKLKERVD ELQRRRSSVR ALDTLKGHTS IPTPTTTTTT SSGTGSPEEE  120
KAWEASEPIL QVRQHDDSSM EVRLICCMER PIKLHEVITI HEEEGAEIIN ANHSVAGRKM  180
FYTIHSRAFS SRIGIDVSRV SERLGALLRL FSRENQASSC MRNNQVLRYT DGTNATPPKE  240
LVSNNDIGGT DKVPNPECES WAEQDQVMWS SLLASISPEL IE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2487460.0AK248746.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf7p01, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020177071.10.0uncharacterized protein LOC109762608
TrEMBLA0A453J8Y50.0A0A453J8Y5_AEGTS; Uncharacterized protein
STRINGEMT194910.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP82936133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10585.14e-12bHLH family protein